Documents in progress and new documents
- The mzQC format, a data standard for reporting and exchanging quality-related information in biological mass spectrometry, has been been released on February 21st, 2024
- The mzIdentML 1.3.0 specification and its crosslinking extension have been released on July 4th, 2024.
- mzSpecLib in anticipation of becoming formal standard
See more details on these documents in progress.
HUPO PSI meeting 2025
The next HUPO PSI meeting will be at the University of Tuebingen, Germany from March 31st-April 3rd. It is intended that this will include a 2 day session on the use of machine-learning in mass-spec proteomics, interactions and related areas. Please watch this space for further details.
HUPO-PSI Working groups and Outputs
The HUPO Proteomics Standards Initiative defines community standards for data representation in proteomics and interactomics to facilitate data comparison, exchange and verification.
| Working Groups | Guidelines | v. | Formats | v. | Controlled Vocabularies | v. |
Molecular | 1.1.2 |
| 2.5.0 | |||
Mass Spectrometry
Proteomics Informatics | Mass spectrometry (MIAPE-MS) | 2.98 | mzML TraML mzData* mzIdentML mzQuantML* mzTab proBed proBAM PEFF USI SDRF-Proteomics mzSpecLib (in development) ProForma (in development) | 1.1.0 | 4.0.15 | |
| Quality Control Group charter | mzQC | 1.0.0 | ||||
| Disordered Proteins Group charter | Minimum Information About Disorder Experiments (MIADE) | 1.0 | ||||
| Protein Separation (Inactive) | Gel electrophoresis (MIAPE-GE) | 1.4 | GelML spML | 1.1.0 1.0.0 | sepCV | 1.0.0 |
* deprecated