Schema MIF25-PAR.xsd

schema location:	C:\local\proteomebinders\docs\protein-binder\src\schema\MIF25-PAR.xsd
attribute form default:	unqualified
element form default:	qualified
targetNamespace:	net:sf:psidev:mi

Elements	Complex types
entrySet	attributeListType
	availabilityType
	baseLocationType
	bibrefType
	bioSourceType
	confidenceListType
	confidenceType
	cvType
	dbReferenceType
	experimentRefListType
	experimentType
	featureElementType
	fullNameType
	interactionElementType
	interactorElementType
	intervalType
	labelType
	namesType
	openCvType
	parameterType
	participantType
	positionType
	xrefType

element entrySet

diagram
namespace	net:sf:psidev:mi
properties	content  complex
children	entry
attributes	Name   Type   Use   Default   Fixed   annotation level xs:int required      2   documentation PSI MI level version xs:int required      5   documentation PSI MI version within given level minorVersion xs:int optional      3
annotation	documentation Root element of the Format

element entrySet/entry

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	source availabilityList experimentList interactorList interactionList attributeList
annotation	documentation Describes one or more interactions (PAR or target protein production or characterization event) as a self-contained unit. Multiple entries from different files can be concatenated into a single entrySet.

element entrySet/entry/source

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names bibref xref attributeList
attributes	Name   Type   Use   Default   Fixed   annotation release derived by: xs:string optional         releaseDate xs:date optional
annotation	documentation Desciption of the source of the entry, for example a PAR or target protein production or characterization centre.

element entrySet/entry/source/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias
annotation	documentation Name(s) of the data source, for example the name of a group, institute or company.

element entrySet/entry/source/bibref

diagram
namespace	net:sf:psidev:mi
type	bibrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	xref attributeList
annotation	documentation Bibliographic reference for the data source. Example: An article which describes the data in the entry.

element entrySet/entry/source/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Cross reference for the data source. Example: Entry in a database of databases.

element entrySet/entry/source/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation Further description of the source. Available attributes are found in the PSI-PAR CV "attribute name".

element entrySet/entry/availabilityList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	availability
annotation	documentation Data availability statements, for example copyrights. The element can also be used to define intellectual properties.

element entrySet/entry/availabilityList/availability

diagram
namespace	net:sf:psidev:mi
type	availabilityType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required
annotation	documentation Describes data availability, e.g. through a copyright statement. If no availability is given, the data is assumed to be freely available.

element entrySet/entry/experimentList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentDescription
annotation	documentation List of all PAR or target protein production or characterization experiments of this entry

element entrySet/entry/experimentList/experimentDescription

diagram
namespace	net:sf:psidev:mi
type	experimentType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
children	names bibref xref hostOrganismList interactionDetectionMethod participantIdentificationMethod featureDetectionMethod confidenceList attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which must be unique to that object within an entry. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Describes one experiment.

element entrySet/entry/interactorList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	interactor
annotation	documentation List of all interactors (e.g. PARs and target proteins) contained in this entry

element entrySet/entry/interactorList/interactor

diagram
namespace	net:sf:psidev:mi
type	interactorElementType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
children	names xref interactorType organism sequence attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation A molecule in its generic/canonical form, as described in a database. (The specific version is described in interaction-participant.) documentation Usage: A protein interactor must contain an xref to UniProt and NCBI-GI where possible.

element entrySet/entry/interactionList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 content  complex
children	interaction
annotation	documentation List of interactions (PAR and protein target production and characterization events).

element entrySet/entry/interactionList/interaction

diagram
namespace	net:sf:psidev:mi
type	extension of interactionElementType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref availabilityRef availability experimentList participantList inferredInteractionList interactionType modelled intraMolecular negative confidenceList parameterList attributeList
attributes	Name   Type   Use   Default   Fixed   annotation imexId xs:string optional         documentation Interaction identifier assigned by the IMEx consortium. Will be unique for an interaction determined in one publication. Details defined in the IMEx documents. id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation An interaction is a PAR production or characterization events.

element entrySet/entry/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the entry. Available attributes are found in the PSI-PAR CV "attribute name".

complexType attributeListType

diagram
namespace	net:sf:psidev:mi
children	attribute
used by	elements  entrySet/entry/source/attributeList entrySet/entry/attributeList dbReferenceType/attributeList bibrefType/attributeList openCvType/attributeList featureElementType/attributeList experimentType/attributeList interactionElementType/attributeList interactorElementType/attributeList participantType/attributeList
annotation	documentation A list of additional attributes. Open tag-value list to allow the inclusion of additional data.

element attributeListType/attribute

diagram
namespace	net:sf:psidev:mi
type	extension of xs:string
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
attributes	Name   Type   Use   Default   Fixed   annotation name derived by: xs:string required         documentation The name of the attribute. nameAc derived by: xs:string optional         documentation Enables control of the attribute type through reference to an external controlled vocabulary. Root element in the PSI MI CV is MI:0590.

complexType availabilityType

diagram
namespace	net:sf:psidev:mi
type	extension of xs:string
properties	base  xs:string
used by	elements  entrySet/entry/availabilityList/availability interactionElementType/availability
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required
annotation	documentation A text describing the availability of data, e.g. a copyright statement.

complexType baseLocationType

diagram
namespace	net:sf:psidev:mi
children	startStatus begin beginInterval endStatus end endInterval isLink
used by	element  featureElementType/featureRangeList/featureRange
annotation	documentation A location on a sequence. Both begin and end can be a defined position, a fuzzy position, or undetermined.

element baseLocationType/startStatus

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 content  complex
children	names xref
annotation	documentation Attribute of the start positions, e.g. "certain" or "n-terminal"

element baseLocationType/begin

diagram
namespace	net:sf:psidev:mi
type	positionType
properties	isRef  0 content  complex
attributes	Name   Type   Use   Default   Fixed   annotation position xs:unsignedLong required
annotation	documentation The integer position gives the begin position of the feature. The first base or amino acid is position 1. In combination with the numeric value, the attribute 'status' allows to express fuzzy positions, e.g. 'less than 4'.

element baseLocationType/beginInterval

diagram
namespace	net:sf:psidev:mi
type	intervalType
properties	isRef  0 content  complex
attributes	Name   Type   Use   Default   Fixed   annotation begin xs:unsignedLong required         end xs:unsignedLong required
annotation	documentation The begin position may be varying or unclear, but localisable to a certain range. Usually written as e.g. 3..5.

element baseLocationType/endStatus

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 content  complex
children	names xref
annotation	documentation Attribute of the end positions, e.g. "certain" or "c-terminal"

element baseLocationType/end

diagram
namespace	net:sf:psidev:mi
type	positionType
properties	isRef  0 content  complex
attributes	Name   Type   Use   Default   Fixed   annotation position xs:unsignedLong required
annotation	documentation The integer position gives the end position of the feature. The first base or amino acid is position 1. In combination with the numeric value, the attribute 'status' allows to express fuzzy positions, e.g. 'more than 400'.

element baseLocationType/endInterval

diagram
namespace	net:sf:psidev:mi
type	intervalType
properties	isRef  0 content  complex
attributes	Name   Type   Use   Default   Fixed   annotation begin xs:unsignedLong required         end xs:unsignedLong required
annotation	documentation The end position may be varying or unclear, but localisable to a certain range. Usually written as e.g. 3..5.

element baseLocationType/isLink

diagram
namespace	net:sf:psidev:mi
type	xs:boolean
properties	isRef  0 minOcc  0 maxOcc  1 content  simple default  false
annotation	documentation True if the described feature is a linking feature connecting two amino acids rather than extending along the sequence. 'begin' references the first amino acid, 'end' the second. Standard example is a disulfide bridge. Does not reference another feature, therefore is only suitable for linking features on the same amino acid chain.

complexType bibrefType

diagram
namespace	net:sf:psidev:mi
children	xref attributeList
used by	elements  entrySet/entry/source/bibref experimentType/bibref
annotation	documentation Bibliographic reference.

element bibrefType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 content  complex
children	primaryRef secondaryRef
annotation	documentation Bibliographic reference in an external database, usually PubMed.

element bibrefType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 content  complex
children	attribute
annotation	documentation Alternative description of bibliographic reference if no external database entry is available.

complexType bioSourceType

diagram
namespace	net:sf:psidev:mi
children	names cellType compartment tissue
used by	elements  experimentType/hostOrganismList/hostOrganism participantType/hostOrganismList/hostOrganism interactorElementType/organism
attributes	Name   Type   Use   Default   Fixed   annotation ncbiTaxId xs:int required
annotation	documentation Describes the biological source of an object, in simple form only the NCBI taxid.

element bioSourceType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias
annotation	documentation The names of the organism.  The short label should be a common name if it exists e.g. "mouse".  The full name should be genus species, e.g. "Mus musculus".

element bioSourceType/cellType

diagram
namespace	net:sf:psidev:mi
type	openCvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref attributeList
annotation	documentation Description of the cell type. Currently no species-independent controlled vocabulary for cell types is available, therefore the choice of reference database(s) is open.

element bioSourceType/compartment

diagram
namespace	net:sf:psidev:mi
type	openCvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref attributeList
annotation	documentation The subcellular compartment of the object. It is strongly recommended to refer to the Gene Ontology cellular component in this element.

element bioSourceType/tissue

diagram
namespace	net:sf:psidev:mi
type	openCvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref attributeList
annotation	documentation Description of the source tissue. Currently no species-independent controlled vocabulary for tissues is available, therefore the choice of reference database(s) is open.

complexType confidenceListType

diagram
namespace	net:sf:psidev:mi
children	confidence
used by	elements  experimentType/confidenceList interactionElementType/confidenceList participantType/confidenceList
annotation	documentation A list of confidence values.

element confidenceListType/confidence

diagram
namespace	net:sf:psidev:mi
type	extension of confidenceType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	unit value experimentRefList

element confidenceListType/confidence/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation Each experiment might assign a different confidence to this object. If no experimentRef is given, this confidence will refer to all experiments associated with the object.

complexType confidenceType

diagram
namespace	net:sf:psidev:mi
children	unit value
used by	element  confidenceListType/confidence
annotation	documentation A confidence value.

element confidenceType/unit

diagram
namespace	net:sf:psidev:mi
type	openCvType
properties	isRef  0 content  complex
children	names xref attributeList

element confidenceType/value

diagram
namespace	net:sf:psidev:mi
type	restriction of xs:string
properties	isRef  0 content  simple

complexType cvType

diagram
namespace	net:sf:psidev:mi
children	names xref
used by	elements  participantType/biologicalRole baseLocationType/endStatus participantType/experimentalPreparationList/experimentalPreparation participantType/experimentalRoleList/experimentalRole featureElementType/featureDetectionMethod experimentType/featureDetectionMethod featureElementType/featureType experimentType/interactionDetectionMethod interactionElementType/interactionType interactorElementType/interactorType experimentType/participantIdentificationMethod participantType/participantIdentificationMethodList/participantIdentificationMethod baseLocationType/startStatus
annotation	documentation Reference to an external controlled vocabulary.

element cvType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 content  complex
children	shortLabel fullName alias
annotation	documentation Name of the controlled vocabulary term.

element cvType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 content  complex
children	primaryRef secondaryRef
annotation	documentation Source of the controlled vocabulary term.  E.g. the name of the CV and the term ID.

complexType dbReferenceType

diagram
namespace	net:sf:psidev:mi
children	attributeList
used by	elements  xrefType/primaryRef xrefType/secondaryRef
attributes	Name   Type   Use   Default   Fixed   annotation db derived by: xs:string required         documentation Name of the external database. Taken from the controlled vocabulary of databases. dbAc derived by: xs:string optional         documentation Accession number of the database in the database CV. This element is controlled by the PSI-PAR CV "database citation". id derived by: xs:string required         documentation Primary identifier of the object in the external database, e.g. UniProt accession number. secondary derived by: xs:string optional         documentation Secondary identifier of the object in the external database, e.g. UniProt ID. version derived by: xs:string optional         documentation The version number of the object in the external database. refType derived by: xs:string optional         documentation Reference type, e.g. "identity" if this reference referes to an identical object in the external database, or "see-also" for additional information. Controlled by CV. refTypeAc derived by: xs:string optional         documentation Reference type accession number from the CV of reference types. This element is controlled by the PSI-PAR CV "xref type".
annotation	documentation Refers to a unique object in an external database.

element dbReferenceType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 content  complex
children	attribute

complexType experimentRefListType

diagram
namespace	net:sf:psidev:mi
children	experimentRef
used by	elements  confidenceListType/confidence/experimentRefList featureElementType/experimentRefList interactionElementType/inferredInteractionList/inferredInteraction/experimentRefList participantType/participantIdentificationMethodList/participantIdentificationMethod/experimentRefList participantType/experimentalRoleList/experimentalRole/experimentRefList participantType/experimentalPreparationList/experimentalPreparation/experimentRefList participantType/experimentalInteractorList/experimentalInteractor/experimentRefList participantType/hostOrganismList/hostOrganism/experimentRefList
annotation	documentation Refers to a list of experiments within the same entry.

element experimentRefListType/experimentRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 minOcc  1 maxOcc  unbounded content  simple
annotation	documentation References an experiment already present in this entry.

complexType experimentType

diagram
namespace	net:sf:psidev:mi
children	names bibref xref hostOrganismList interactionDetectionMethod participantIdentificationMethod featureDetectionMethod confidenceList attributeList
used by	elements  entrySet/entry/experimentList/experimentDescription interactionElementType/experimentList/experimentDescription
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which must be unique to that object within an entry. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Describes one set of experimental parameters.

element experimentType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias

element experimentType/bibref

diagram
namespace	net:sf:psidev:mi
type	bibrefType
properties	isRef  0 content  complex
children	xref attributeList
annotation	documentation Publication describing the experiment.

element experimentType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Reference to a description of the experiment in an external database.

element experimentType/hostOrganismList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	hostOrganism
annotation	documentation The organism(s) in which the experiment has been performed for example yeast for a yeast-two-hybrid experiment.

element experimentType/hostOrganismList/hostOrganism

diagram
namespace	net:sf:psidev:mi
type	extension of bioSourceType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names cellType compartment tissue
attributes	Name   Type   Use   Default   Fixed   annotation ncbiTaxId xs:int required

element experimentType/interactionDetectionMethod

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 content  complex
children	names xref
annotation	documentation Experimental method to produce or characterize a PAR or target protein. This element is controlled by the PSI-PAR CVs "molecule production method" and "interaction detection method", respectively.

element experimentType/participantIdentificationMethod

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref
annotation	documentation Experimental method to determine the identity of the interactors (e.g. PAR or target protein). This element is controlled by the PSI-PAR CV "participant identification method".

element experimentType/featureDetectionMethod

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref
annotation	documentation Experimental method used to indentify the experimental and biological features (see interaction-participant-feature). If this element is filled it is assumed to apply to all features associated with the experiment. This can be overridden by specifying a featureDetectionMethod in the individual feature. This element is controlled by the PSI-PAR CV "feature detection method".

element experimentType/confidenceList

diagram
namespace	net:sf:psidev:mi
type	confidenceListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	confidence
annotation	documentation Confidence in this experiment.  Usually a statistical measure.

element experimentType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the experiment. Available attributes are found in the PSI-PAR CV "attribute name".

complexType featureElementType

diagram
namespace	net:sf:psidev:mi
children	names xref featureType featureDetectionMethod experimentRefList featureRangeList attributeList
used by	element  participantType/featureList/feature
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required
annotation	documentation A feature, e.g. domain, on a sequence.

element featureElementType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias
annotation	documentation Name(s) for the feature, e.g. SH3 domain.

element featureElementType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Reference to an external feature description, for example InterPro entry.

element featureElementType/featureType

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref
annotation	documentation Description and classification of the feature. This element is controlled by the PSI-PAR CV "feature type".

element featureElementType/featureDetectionMethod

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref
annotation	documentation Experimental method used to identify the feature. A setting here overrides the global setting given in the experimentDescription. This element is controlled by the PSI-PAR CV "feature detection method".

element featureElementType/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments linked to the interaction.

element featureElementType/featureRangeList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 content  complex
children	featureRange
annotation	documentation Location(s) of the feature on the sequence of the participant (e.g. a PAR or target protein).

element featureElementType/featureRangeList/featureRange

diagram
namespace	net:sf:psidev:mi
type	baseLocationType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	startStatus begin beginInterval endStatus end endInterval isLink
annotation	documentation Location of the feature on the sequence of the interactor. One feature may have more than one featureRange, used e.g. for features which involve sequence positions close in the folded, three-dimensional state of a protein, but non-continuous along the sequence. This element is controlled by the PSI-PAR CV "feature range status".

element featureElementType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the feature. Available attributes are found in the PSI-PAR CV "attribute name".

complexType fullNameType

diagram
namespace	net:sf:psidev:mi
type	extension of xs:string
properties	base  xs:string
annotation	documentation Full, descriptive object name.

complexType interactionElementType

diagram
namespace	net:sf:psidev:mi
children	names xref availabilityRef availability experimentList participantList inferredInteractionList interactionType modelled intraMolecular negative confidenceList parameterList attributeList
used by	element  entrySet/entry/interactionList/interaction
attributes	Name   Type   Use   Default   Fixed   annotation imexId xs:string optional         documentation Interaction identifier assigned by the IMEx consortium. Will be unique for an interaction determined in one publication. Details defined in the IMEx documents. id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation A molecular interaction.

element interactionElementType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias
annotation	documentation Name(s) of the interaction (generation or characterization event).

element interactionElementType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Reference to an entry/ID of this interaction in a database e.g. the local database of a PAR or target protein production or characterization center.

element interactionElementType/availabilityRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation References an availability statement already present in this entry.

element interactionElementType/availability

diagram
namespace	net:sf:psidev:mi
type	availabilityType
properties	isRef  0 content  complex
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required
annotation	documentation Describes the availability of the interaction data. If no availability is given, the data is assumed to be freely available.

element interactionElementType/experimentList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 content  complex
children	experimentRef experimentDescription
annotation	documentation List of experiments.

element interactionElementType/experimentList/experimentRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation References an experiment already present in this entry.

element interactionElementType/experimentList/experimentDescription

diagram
namespace	net:sf:psidev:mi
type	experimentType
properties	isRef  0 content  complex
children	names bibref xref hostOrganismList interactionDetectionMethod participantIdentificationMethod featureDetectionMethod confidenceList attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which must be unique to that object within an entry. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Describes the set of experimental parameters for one experiment.

element interactionElementType/participantList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 content  complex
children	participant
annotation	documentation Specific information for one or more molecules being generated or experimentally analysed. The participant holds additional information than is described for the same molecule in the interactor element (entry-interactor).

element interactionElementType/participantList/participant

diagram
namespace	net:sf:psidev:mi
type	participantType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref interactorRef interactor interactionRef participantIdentificationMethodList biologicalRole experimentalRoleList experimentalPreparationList experimentalInteractorList featureList hostOrganismList confidenceList parameterList attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required

element interactionElementType/inferredInteractionList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	inferredInteraction
annotation	documentation This element is not used for the representation of PAR data.

element interactionElementType/inferredInteractionList/inferredInteraction

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	participant experimentRefList
annotation	documentation This element is not used for the representation of PAR data.

element interactionElementType/inferredInteractionList/inferredInteraction/participant

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  2 maxOcc  unbounded content  complex
children	participantRef participantFeatureRef
annotation	documentation Participant of the inferred interaction.

element interactionElementType/inferredInteractionList/inferredInteraction/participant/participantRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple

element interactionElementType/inferredInteractionList/inferredInteraction/participant/participantFeatureRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple

element interactionElementType/inferredInteractionList/inferredInteraction/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments linked to the interaction.

element interactionElementType/interactionType

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
children	names xref
annotation	documentation Describes the interaction type, for example "physical interaction". This element is controlled by the PSI-MI controlled vocabularies "interaction type" and "experimental scope".

element interactionElementType/modelled

diagram
namespace	net:sf:psidev:mi
type	xs:boolean
properties	isRef  0 minOcc  0 maxOcc  1 content  simple
annotation	documentation This element is not used for the representation of PAR data.

element interactionElementType/intraMolecular

diagram
namespace	net:sf:psidev:mi
type	xs:boolean
properties	isRef  0 minOcc  0 maxOcc  1 content  simple default  false
annotation	documentation If true, this interaction is an intramolecular interaction, e.g. an autophosphorylation. If missing, this element is assumed to be false.

element interactionElementType/negative

diagram
namespace	net:sf:psidev:mi
type	xs:boolean
properties	isRef  0 minOcc  0 maxOcc  1 content  simple default  false
annotation	documentation This element can be used to show that an interaction has been shown NOT to occur under the described experimental conditions (defaults false). Typically used for PAR interactions with negative controls in experiments assessing cross-reactivity.

element interactionElementType/confidenceList

diagram
namespace	net:sf:psidev:mi
type	confidenceListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	confidence
annotation	documentation Confidence in this interaction. Usually a statistical measure.

element interactionElementType/parameterList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	parameter
annotation	documentation Lists parameters which are relevant for the Interaction. This includes both experimental parameters, such as reaction time and concentration, and results such as affinity and kinetic measurements.

element interactionElementType/parameterList/parameter

diagram
namespace	net:sf:psidev:mi
type	extension of parameterType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	experimentRef
attributes	Name   Type   Use   Default   Fixed   annotation term derived by: xs:string required         documentation The kind of parameter, e.g. "dissociation constant". termAc derived by: xs:string optional         documentation Accession number of the term in the associated controlled vocabulary. unit derived by: xs:string optional         documentation The unit of the term, e.g. "kiloDalton". unitAc derived by: xs:string optional         documentation Accession number of the unit in the associated controlled vocabulary. base xs:short optional   10      documentation Base of the parameter expression. Defaults to 10. exponent xs:short optional   0      documentation Exponent of the value. factor xs:decimal required         documentation The "main" value of the parameter. uncertainty xs:decimal optional
annotation	documentation Experimental parameter or result, that have a numeric value and an unit, e.g. affinity. This element is controlled by the PSI-PAR CV "parameter type".

element interactionElementType/parameterList/parameter/experimentRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation Reference to the experiment that this parameter describes or resutls from. If not given, it is assumed that this is valid for all experiments attached to the interaction.

element interactionElementType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the interaction. Available attributes are found in the PSI-PAR CV "attribute name".

complexType interactorElementType

diagram
namespace	net:sf:psidev:mi
children	names xref interactorType organism sequence attributeList
used by	elements  entrySet/entry/interactorList/interactor participantType/interactor participantType/experimentalInteractorList/experimentalInteractor/interactor
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Describes a molecular interactor.

element interactorElementType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 content  complex
children	shortLabel fullName alias
annotation	documentation Name(s).  The short label is typically a short name e.g. a gene name.

element interactorElementType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation A cross-reference to a database. If the interactor is not available in any external database, it must be defined by its sequence or structure formula.

element interactorElementType/interactorType

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 content  complex
children	names xref
annotation	documentation The molecular type of the interactor, e.g. protein, gene or small molecule. This element is controlled by the PSI-PAR CV "interactorType".

element interactorElementType/organism

diagram
namespace	net:sf:psidev:mi
type	extension of bioSourceType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names cellType compartment tissue
attributes	Name   Type   Use   Default   Fixed   annotation ncbiTaxId xs:int required
annotation	documentation The native organism of the interactor.

element interactorElementType/sequence

diagram
namespace	net:sf:psidev:mi
type	restriction of xs:string
properties	isRef  0 minOcc  0 maxOcc  1 content  simple
annotation	documentation Sequence in uppercase documentation Usage:

element interactorElementType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the interactor. Available attributes are found in the PSI-PAR CV "attribute name".

complexType intervalType

diagram
namespace	net:sf:psidev:mi
used by	elements  baseLocationType/beginInterval baseLocationType/endInterval
attributes	Name   Type   Use   Default   Fixed   annotation begin xs:unsignedLong required         end xs:unsignedLong required
annotation	documentation A interval on a sequence.

complexType labelType

diagram
namespace	net:sf:psidev:mi
type	extension of xs:string
properties	base  xs:string
annotation	documentation A short alphanumeric label identifying an object. Not necessarily unique.

complexType namesType

diagram
namespace	net:sf:psidev:mi
children	shortLabel fullName alias
used by	elements  entrySet/entry/source/names bioSourceType/names cvType/names openCvType/names featureElementType/names experimentType/names interactionElementType/names interactorElementType/names participantType/names
annotation	documentation Names for an object.

element namesType/shortLabel

diagram
namespace	net:sf:psidev:mi
type	restriction of xs:string
properties	isRef  0 minOcc  0 maxOcc  1 content  simple
annotation	documentation A catchy short designation, suitable to remember the object. Can be e.g. a gene name, the first author of a paper, etc.

element namesType/fullName

diagram
namespace	net:sf:psidev:mi
type	restriction of xs:string
properties	isRef  0 minOcc  0 maxOcc  1 content  simple
annotation	documentation A full, detailed name of the object. Can be e.g. the full title of a publication.

element namesType/alias

diagram
namespace	net:sf:psidev:mi
type	extension of xs:string
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
attributes	Name   Type   Use   Default   Fixed   annotation typeAc derived by: xs:string optional         type derived by: xs:string optional
annotation	documentation Alias of the object. This element is controlled by the PSI-PAR CV "alias type".

complexType openCvType

diagram
namespace	net:sf:psidev:mi
children	names xref attributeList
used by	elements  bioSourceType/cellType bioSourceType/compartment bioSourceType/tissue confidenceType/unit
annotation	documentation Allows to reference an external controlled vocabulary, or to directly include a value if no suitable external definition is available.

element openCvType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 content  complex
children	shortLabel fullName alias
annotation	documentation This contains the controlled vocabulary terms, as a short and optionally as a long form.

element openCvType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Refers to the term of the controlled vocabulary in an external database.

element openCvType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation If no suitable external controlled vocabulary is available, this attributeList can be used to describe the term. Example: Attribute name: Mouse atlas tissue name; attribute value: spinal cord, day 30.

complexType parameterType

diagram
namespace	net:sf:psidev:mi
used by	elements  interactionElementType/parameterList/parameter participantType/parameterList/parameter
attributes	Name   Type   Use   Default   Fixed   annotation term derived by: xs:string required         documentation The kind of parameter, e.g. "dissociation constant". termAc derived by: xs:string optional         documentation Accession number of the term in the associated controlled vocabulary. unit derived by: xs:string optional         documentation The unit of the term, e.g. "kiloDalton". unitAc derived by: xs:string optional         documentation Accession number of the unit in the associated controlled vocabulary. base xs:short optional   10      documentation Base of the parameter expression. Defaults to 10. exponent xs:short optional   0      documentation Exponent of the value. factor xs:decimal required         documentation The "main" value of the parameter.
annotation	documentation A numeric parameter, e.g. for a kinetic value

complexType participantType

diagram
namespace	net:sf:psidev:mi
children	names xref interactorRef interactor interactionRef participantIdentificationMethodList biologicalRole experimentalRoleList experimentalPreparationList experimentalInteractorList featureList hostOrganismList confidenceList parameterList attributeList
used by	element  interactionElementType/participantList/participant
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required
annotation	documentation A molecule participating in an interaction.

element participantType/names

diagram
namespace	net:sf:psidev:mi
type	namesType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	shortLabel fullName alias
annotation	documentation This contains the name(s) for the participant.

element participantType/xref

diagram
namespace	net:sf:psidev:mi
type	xrefType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	primaryRef secondaryRef
annotation	documentation Contains the cross-references for the participant.

element participantType/interactorRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation References an interactor described in the interactorList of the entry.

element participantType/interactor

diagram
namespace	net:sf:psidev:mi
type	interactorElementType
properties	isRef  0 content  complex
children	names xref interactorType organism sequence attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Full description of an interactor.

element participantType/interactionRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation References an interaction described in this entry. Used for the hierarchical buildup of complexes.

element participantType/participantIdentificationMethodList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	participantIdentificationMethod
annotation	documentation The method(s) by which the identity of the participant (e.g. PAR or target proteint) has been determined. If this element is present, its value overrides any description given in experimentDescription/ participantIdentificationMethod.

element participantType/participantIdentificationMethodList/participantIdentificationMethod

diagram
namespace	net:sf:psidev:mi
type	extension of cvType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref experimentRefList
annotation	documentation Experimental method to determine the identity of a participant e.g. a PAR or target protein. This element is controlled by the PSI-PAR CV "participant identification method".

element participantType/participantIdentificationMethodList/participantIdentificationMethod/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments linked to the interaction.

element participantType/biologicalRole

diagram
namespace	net:sf:psidev:mi
type	cvType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	names xref
annotation	documentation The biological role of the participant (e.g. PAR or target proteint), e.g. "protein affinity reagent" or "PAR target". This element is controlled by the PSI-PAR CV "biological role".

element participantType/experimentalRoleList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentalRole
annotation	documentation The role(s) of the participant (e.g. PAR or target protein) in the experiment e.g "bait", "prey" or "negative control". This element is controlled by the PSI-PAR CV "experimental role".

element participantType/experimentalRoleList/experimentalRole

diagram
namespace	net:sf:psidev:mi
type	extension of cvType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref experimentRefList
annotation	documentation The role of the participant (e.g. PAR or target protein) in the experiment e.g "bait", "prey" or "negative control". This element is controlled by the PSI-PAR CV "experimental role".

element participantType/experimentalRoleList/experimentalRole/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments associated with the interaction.

element participantType/experimentalPreparationList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentalPreparation
annotation	documentation Terms describing the preparation of the participant.

element participantType/experimentalPreparationList/experimentalPreparation

diagram
namespace	net:sf:psidev:mi
type	extension of cvType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref experimentRefList
annotation	documentation Terms describing the preparation of the participant. This element is controlled by the PSI-PAR CV "experimental preparation".

element participantType/experimentalPreparationList/experimentalPreparation/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments associated with the interaction.

element participantType/experimentalInteractorList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentalInteractor
annotation	documentation This element is not used for the representation of PAR data.

element participantType/experimentalInteractorList/experimentalInteractor

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	interactorRef interactor experimentRefList

element participantType/experimentalInteractorList/experimentalInteractor/interactorRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation References an interactor described in the interactorList of the entry

element participantType/experimentalInteractorList/experimentalInteractor/interactor

diagram
namespace	net:sf:psidev:mi
type	interactorElementType
properties	isRef  0 content  complex
children	names xref interactorType organism sequence attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required         documentation All major objects have a numerical id which is unique to that object within a PSI MI file. The object may be repeated, though, e.g. in the denormalised representation.
annotation	documentation Fully describes an interactor

element participantType/experimentalInteractorList/experimentalInteractor/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments linked to the interaction.

element participantType/featureList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	feature
annotation	documentation Relevant sequence features, for example binding domains, and experimental modifications, e.g. protein tags.

element participantType/featureList/feature

diagram
namespace	net:sf:psidev:mi
type	featureElementType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	names xref featureType featureDetectionMethod experimentRefList featureRangeList attributeList
attributes	Name   Type   Use   Default   Fixed   annotation id xs:int required

element participantType/hostOrganismList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	hostOrganism
annotation	documentation The host organism(s) in which the participant (e.g. a PAR or target protein) has been produced, e.g. expressed. If not given, it is assumed to be the native species.

element participantType/hostOrganismList/hostOrganism

diagram
namespace	net:sf:psidev:mi
type	extension of bioSourceType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
children	names cellType compartment tissue experimentRefList
attributes	Name   Type   Use   Default   Fixed   annotation ncbiTaxId xs:int required

element participantType/hostOrganismList/hostOrganism/experimentRefList

diagram
namespace	net:sf:psidev:mi
type	experimentRefListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	experimentRef
annotation	documentation If no experimentRef is given, it is assumed this refers to all experiments associated with the interaction.

element participantType/confidenceList

diagram
namespace	net:sf:psidev:mi
type	confidenceListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	confidence
annotation	documentation Confidence in the identity of the participant i.e. the correctness of the participantIdentificationMethod.  Usually a statistical measure.

element participantType/parameterList

diagram
namespace	net:sf:psidev:mi
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	parameter
annotation	documentation Lists properties of the participant (e.g. a PAR or target protein) that can be described as parameters having a numeric value and an unit, e.g. molecular weight.

element participantType/parameterList/parameter

diagram
namespace	net:sf:psidev:mi
type	extension of parameterType
properties	isRef  0 minOcc  1 maxOcc  unbounded content  complex
children	experimentRef
attributes	Name   Type   Use   Default   Fixed   annotation term derived by: xs:string required         documentation The kind of parameter, e.g. "dissociation constant". termAc derived by: xs:string optional         documentation Accession number of the term in the associated controlled vocabulary. unit derived by: xs:string optional         documentation The unit of the term, e.g. "kiloDalton". unitAc derived by: xs:string optional         documentation Accession number of the unit in the associated controlled vocabulary. base xs:short optional   10      documentation Base of the parameter expression. Defaults to 10. exponent xs:short optional   0      documentation Exponent of the value. factor xs:decimal required         documentation The "main" value of the parameter. uncertainty xs:decimal optional
annotation	documentation A property that can be described as parameters having a numeric value and an unit, e.g. molecular weight. This element is controlled by the PSI-PAR CV "parameter type".

element participantType/parameterList/parameter/experimentRef

diagram
namespace	net:sf:psidev:mi
type	xs:int
properties	isRef  0 content  simple
annotation	documentation This element is not used here.

element participantType/attributeList

diagram
namespace	net:sf:psidev:mi
type	attributeListType
properties	isRef  0 minOcc  0 maxOcc  1 content  complex
children	attribute
annotation	documentation List of additional attributes of the participant (e.g. a PAR or target protein). Available attributes are found in the PSI-PAR CV "attribute name".

complexType positionType

diagram
namespace	net:sf:psidev:mi
used by	elements  baseLocationType/begin baseLocationType/end
attributes	Name   Type   Use   Default   Fixed   annotation position xs:unsignedLong required

complexType xrefType

diagram
namespace	net:sf:psidev:mi
children	primaryRef secondaryRef
used by	elements  entrySet/entry/source/xref bibrefType/xref cvType/xref openCvType/xref featureElementType/xref experimentType/xref interactionElementType/xref interactorElementType/xref participantType/xref
annotation	documentation Crossreference to an external database. Crossreferences to literature databases, e.g. PubMed, should not be put into this structure, but into the bibRef element where possible. This element is controlled by the PSI-MI controlled vocabularies "cross-reference type" and "database citation".

element xrefType/primaryRef

diagram
namespace	net:sf:psidev:mi
type	dbReferenceType
properties	isRef  0 content  complex
children	attributeList
attributes	Name   Type   Use   Default   Fixed   annotation db derived by: xs:string required         documentation Name of the external database. Taken from the controlled vocabulary of databases. dbAc derived by: xs:string optional         documentation Accession number of the database in the database CV. This element is controlled by the PSI-PAR CV "database citation". id derived by: xs:string required         documentation Primary identifier of the object in the external database, e.g. UniProt accession number. secondary derived by: xs:string optional         documentation Secondary identifier of the object in the external database, e.g. UniProt ID. version derived by: xs:string optional         documentation The version number of the object in the external database. refType derived by: xs:string optional         documentation Reference type, e.g. "identity" if this reference referes to an identical object in the external database, or "see-also" for additional information. Controlled by CV. refTypeAc derived by: xs:string optional         documentation Reference type accession number from the CV of reference types. This element is controlled by the PSI-PAR CV "xref type".
annotation	documentation Primary reference to an external database.

element xrefType/secondaryRef

diagram
namespace	net:sf:psidev:mi
type	dbReferenceType
properties	isRef  0 minOcc  0 maxOcc  unbounded content  complex
children	attributeList
attributes	Name   Type   Use   Default   Fixed   annotation db derived by: xs:string required         documentation Name of the external database. Taken from the controlled vocabulary of databases. dbAc derived by: xs:string optional         documentation Accession number of the database in the database CV. This element is controlled by the PSI-PAR CV "database citation". id derived by: xs:string required         documentation Primary identifier of the object in the external database, e.g. UniProt accession number. secondary derived by: xs:string optional         documentation Secondary identifier of the object in the external database, e.g. UniProt ID. version derived by: xs:string optional         documentation The version number of the object in the external database. refType derived by: xs:string optional         documentation Reference type, e.g. "identity" if this reference referes to an identical object in the external database, or "see-also" for additional information. Controlled by CV. refTypeAc derived by: xs:string optional         documentation Reference type accession number from the CV of reference types. This element is controlled by the PSI-PAR CV "xref type".
annotation	documentation Further references to external databases.

XML Schema documentation generated by XMLSpy Schema Editor http://www.altova.com/xmlspy